Arabidopsis leucine-rich repeat extensin (LRX) proteins modify cell wall composition and influence plant growth
Identifieur interne : 003155 ( Main/Exploration ); précédent : 003154; suivant : 003156Arabidopsis leucine-rich repeat extensin (LRX) proteins modify cell wall composition and influence plant growth
Auteurs : Christian Draeger [Suisse] ; Tohnyui Ndinyanka Fabrice [Suisse] ; Emilie Gineau [France] ; Grégory Mouille [France] ; Benjamin M. Kuhn [États-Unis] ; Isabel Moller [Australie, Nouvelle-Zélande] ; Marie-Therese Abdou [Suisse] ; Beat Frey [Suisse] ; Markus Pauly [États-Unis] ; Antony Bacic [Australie] ; Christoph Ringli [Suisse]Source :
- BMC Plant Biology [ 1471-2229 ] ; 2015.
Descripteurs français
- KwdFr :
- Alignement de séquences, Arabidopsis (croissance et développement), Arabidopsis (génétique), Données de séquences moléculaires, Glycoprotéines (génétique), Glycoprotéines (métabolisme), Leucine (métabolisme), Paroi cellulaire (métabolisme), Protéines d'Arabidopsis (génétique), Protéines d'Arabidopsis (métabolisme), Régulation de l'expression des gènes végétaux, Séquence d'acides aminés.
- MESH :
- croissance et développement : Arabidopsis.
- génétique : Arabidopsis, Glycoprotéines, Protéines d'Arabidopsis.
- métabolisme : Glycoprotéines, Leucine, Paroi cellulaire, Protéines d'Arabidopsis.
- Alignement de séquences, Données de séquences moléculaires, Régulation de l'expression des gènes végétaux, Séquence d'acides aminés.
English descriptors
- KwdEn :
- Amino Acid Sequence, Arabidopsis (genetics), Arabidopsis (growth & development), Arabidopsis Proteins (genetics), Arabidopsis Proteins (metabolism), Cell Wall (metabolism), Gene Expression Regulation, Plant, Glycoproteins (genetics), Glycoproteins (metabolism), Leucine (metabolism), Molecular Sequence Data, Sequence Alignment.
- MESH :
- chemical , genetics : Arabidopsis Proteins, Glycoproteins.
- genetics : Arabidopsis.
- growth & development : Arabidopsis.
- chemical , metabolism : Arabidopsis Proteins, Cell Wall, Glycoproteins, Leucine.
- Amino Acid Sequence, Gene Expression Regulation, Plant, Molecular Sequence Data, Sequence Alignment.
Abstract
Leucine-rich repeat extensins (LRXs) are extracellular proteins consisting of an N-terminal leucine-rich repeat (LRR) domain and a C-terminal extensin domain containing the typical features of this class of structural hydroxyproline-rich glycoproteins (HRGPs). The LRR domain is likely to bind an interaction partner, whereas the extensin domain has an anchoring function to insolubilize the protein in the cell wall. Based on the analysis of the root hair-expressed
The
LRX3, LRX4, and LRX5, and most likely LRX proteins in general, are important for cell wall development. Due to the complexity of changes in cell wall structures in the
The online version of this article (doi:10.1186/s12870-015-0548-8) contains supplementary material, which is available to authorized users.
Url:
DOI: 10.1186/s12870-015-0548-8
PubMed: 26099801
PubMed Central: 4477543
Affiliations:
- Australie, France, Nouvelle-Zélande, Suisse, États-Unis
- Californie, Canton de Zurich, Victoria (État), Île-de-France
- Melbourne, Versailles, Zurich
- Université de Melbourne, Université de Zurich
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Le document en format XML
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Kuhn</name><affiliation wicri:level="2"><nlm:aff id="Aff2">Department of Plant and Microbial Biology, UC Berkeley, Berkeley, CA 94720 USA</nlm:aff><country xml:lang="fr">États-Unis</country><placeName><region type="state">Californie</region></placeName><wicri:cityArea>Department of Plant and Microbial Biology, UC Berkeley, Berkeley</wicri:cityArea></affiliation></author><author><name sortKey="Moller, Isabel" sort="Moller, Isabel" uniqKey="Moller I" first="Isabel" last="Moller">Isabel Moller</name><affiliation wicri:level="4"><nlm:aff id="Aff5">ARC Centre of Excellence in Plant Cell Walls, School of Botany, the University of Melbourne, Parkville, Victoria 3010 Australia</nlm:aff><orgName type="university">Université de Melbourne</orgName><country>Australie</country><placeName><settlement type="city">Melbourne</settlement><region type="état">Victoria (État)</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="Aff7">Current address: The New Zealand Institute for 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sort="Draeger, Christian" uniqKey="Draeger C" first="Christian" last="Draeger">Christian Draeger</name><affiliation wicri:level="4"><nlm:aff id="Aff1">Institute of Plant Biology, University of Zürich, Zollikerstr. 107, Zürich, 8008 Switzerland</nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>Institute of Plant Biology, University of Zürich, Zollikerstr. 107, Zürich</wicri:regionArea><placeName><settlement type="city">Zurich</settlement><region nuts="3" type="region">Canton de Zurich</region><settlement type="city">Zurich</settlement></placeName><orgName type="university">Université de Zurich</orgName></affiliation><affiliation wicri:level="1"><nlm:aff id="Aff8">Current address: Thermo Fisher Scientific, Neuhofstrasse 11, 4153, Reinach, Switzerland</nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>Current address: Thermo Fisher Scientific, Neuhofstrasse 11, 4153, 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id="Aff3">INRA, Institut Jean-Pierre Bourgin, UMR1318 Saclay Plant Sciences, Versailles, 78026 France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>INRA, Institut Jean-Pierre Bourgin, UMR1318 Saclay Plant Sciences, Versailles</wicri:regionArea><placeName><region type="region">Île-de-France</region><region type="old region">Île-de-France</region><settlement type="city">Versailles</settlement></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="Aff4">AgroParisTech, Institut Jean-Pierre Bourgin, UMR1318 Saclay Plant Sciences, Versailles, 78026 France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>AgroParisTech, Institut Jean-Pierre Bourgin, UMR1318 Saclay Plant Sciences, Versailles</wicri:regionArea><placeName><region type="region">Île-de-France</region><region type="old region">Île-de-France</region><settlement type="city">Versailles</settlement></placeName></affiliation></author><author><name sortKey="Mouille, Gregory" sort="Mouille, Gregory" uniqKey="Mouille G" first="Grégory" last="Mouille">Grégory Mouille</name><affiliation wicri:level="3"><nlm:aff id="Aff3">INRA, Institut Jean-Pierre Bourgin, UMR1318 Saclay Plant Sciences, Versailles, 78026 France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>INRA, Institut Jean-Pierre Bourgin, UMR1318 Saclay Plant Sciences, Versailles</wicri:regionArea><placeName><region type="region">Île-de-France</region><region type="old region">Île-de-France</region><settlement type="city">Versailles</settlement></placeName></affiliation></author><author><name sortKey="Kuhn, Benjamin M" sort="Kuhn, Benjamin M" uniqKey="Kuhn B" first="Benjamin M." last="Kuhn">Benjamin M. Kuhn</name><affiliation wicri:level="2"><nlm:aff id="Aff2">Department of Plant and Microbial Biology, UC Berkeley, Berkeley, CA 94720 USA</nlm:aff><country xml:lang="fr">États-Unis</country><placeName><region type="state">Californie</region></placeName><wicri:cityArea>Department of Plant and Microbial Biology, UC Berkeley, Berkeley</wicri:cityArea></affiliation></author><author><name sortKey="Moller, Isabel" sort="Moller, Isabel" uniqKey="Moller I" first="Isabel" last="Moller">Isabel Moller</name><affiliation wicri:level="4"><nlm:aff id="Aff5">ARC Centre of Excellence in Plant Cell Walls, School of Botany, the University of Melbourne, Parkville, Victoria 3010 Australia</nlm:aff><orgName type="university">Université de Melbourne</orgName><country>Australie</country><placeName><settlement type="city">Melbourne</settlement><region type="état">Victoria (État)</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="Aff7">Current address: The New Zealand Institute for Plant & Food Research Limited, Auckland, 1142 New Zealand</nlm:aff><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea>Current address: The New Zealand Institute for Plant & Food Research Limited, Auckland</wicri:regionArea><wicri:noRegion>Auckland</wicri:noRegion></affiliation></author><author><name sortKey="Abdou, Marie Therese" sort="Abdou, Marie Therese" uniqKey="Abdou M" first="Marie-Therese" last="Abdou">Marie-Therese Abdou</name><affiliation wicri:level="4"><nlm:aff id="Aff1">Institute of Plant Biology, University of Zürich, Zollikerstr. 107, Zürich, 8008 Switzerland</nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>Institute of Plant Biology, University of Zürich, Zollikerstr. 107, Zürich</wicri:regionArea><placeName><settlement type="city">Zurich</settlement><region nuts="3" type="region">Canton de Zurich</region><settlement type="city">Zurich</settlement></placeName><orgName type="university">Université de Zurich</orgName></affiliation></author><author><name sortKey="Frey, Beat" sort="Frey, Beat" uniqKey="Frey B" first="Beat" last="Frey">Beat Frey</name><affiliation wicri:level="1"><nlm:aff id="Aff6">Swiss Federal Research Institute WSL, Birmensdorf, 8903 Switzerland</nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>Swiss Federal Research Institute WSL, Birmensdorf</wicri:regionArea><wicri:noRegion>Birmensdorf</wicri:noRegion></affiliation></author><author><name sortKey="Pauly, Markus" sort="Pauly, Markus" uniqKey="Pauly M" first="Markus" last="Pauly">Markus Pauly</name><affiliation wicri:level="2"><nlm:aff id="Aff2">Department of Plant and Microbial Biology, UC Berkeley, Berkeley, CA 94720 USA</nlm:aff><country xml:lang="fr">États-Unis</country><placeName><region type="state">Californie</region></placeName><wicri:cityArea>Department of Plant and Microbial Biology, UC Berkeley, Berkeley</wicri:cityArea></affiliation></author><author><name sortKey="Bacic, Antony" sort="Bacic, Antony" uniqKey="Bacic A" first="Antony" last="Bacic">Antony Bacic</name><affiliation wicri:level="4"><nlm:aff id="Aff5">ARC Centre of Excellence in Plant Cell Walls, School of Botany, the University of Melbourne, Parkville, Victoria 3010 Australia</nlm:aff><orgName type="university">Université de Melbourne</orgName><country>Australie</country><placeName><settlement type="city">Melbourne</settlement><region type="état">Victoria (État)</region></placeName></affiliation></author><author><name sortKey="Ringli, Christoph" sort="Ringli, Christoph" uniqKey="Ringli C" first="Christoph" last="Ringli">Christoph Ringli</name><affiliation wicri:level="4"><nlm:aff id="Aff1">Institute of Plant Biology, University of Zürich, Zollikerstr. 107, Zürich, 8008 Switzerland</nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>Institute of Plant Biology, University of Zürich, Zollikerstr. 107, Zürich</wicri:regionArea><placeName><settlement type="city">Zurich</settlement><region nuts="3" type="region">Canton de Zurich</region><settlement type="city">Zurich</settlement></placeName><orgName type="university">Université de Zurich</orgName></affiliation></author></analytic><series><title level="j">BMC Plant Biology</title><idno type="eISSN">1471-2229</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amino Acid Sequence</term><term>Arabidopsis (genetics)</term><term>Arabidopsis (growth & development)</term><term>Arabidopsis Proteins (genetics)</term><term>Arabidopsis Proteins (metabolism)</term><term>Cell Wall (metabolism)</term><term>Gene Expression Regulation, Plant</term><term>Glycoproteins (genetics)</term><term>Glycoproteins (metabolism)</term><term>Leucine (metabolism)</term><term>Molecular Sequence Data</term><term>Sequence Alignment</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Alignement de séquences</term><term>Arabidopsis (croissance et développement)</term><term>Arabidopsis (génétique)</term><term>Données de séquences moléculaires</term><term>Glycoprotéines (génétique)</term><term>Glycoprotéines (métabolisme)</term><term>Leucine (métabolisme)</term><term>Paroi cellulaire (métabolisme)</term><term>Protéines d'Arabidopsis (génétique)</term><term>Protéines d'Arabidopsis (métabolisme)</term><term>Régulation de l'expression des gènes végétaux</term><term>Séquence d'acides aminés</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Arabidopsis Proteins</term><term>Glycoproteins</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Arabidopsis</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Arabidopsis</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Arabidopsis</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Arabidopsis</term><term>Glycoprotéines</term><term>Protéines d'Arabidopsis</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Arabidopsis Proteins</term><term>Cell Wall</term><term>Glycoproteins</term><term>Leucine</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Glycoprotéines</term><term>Leucine</term><term>Paroi cellulaire</term><term>Protéines d'Arabidopsis</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term><term>Gene Expression Regulation, Plant</term><term>Molecular Sequence Data</term><term>Sequence Alignment</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Alignement de séquences</term><term>Données de séquences moléculaires</term><term>Régulation de l'expression des gènes végétaux</term><term>Séquence d'acides aminés</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><sec><title>Background</title><p>Leucine-rich repeat extensins (LRXs) are extracellular proteins consisting of an N-terminal leucine-rich repeat (LRR) domain and a C-terminal extensin domain containing the typical features of this class of structural hydroxyproline-rich glycoproteins (HRGPs). The LRR domain is likely to bind an interaction partner, whereas the extensin domain has an anchoring function to insolubilize the protein in the cell wall. Based on the analysis of the root hair-expressed <italic>LRX1</italic> and <italic>LRX2</italic> of <italic>Arabidopsis thaliana</italic>, LRX proteins are important for cell wall development. The importance of LRX proteins in non-root hair cells and on the structural changes induced by mutations in <italic>LRX</italic> genes remains elusive.</p></sec><sec><title>Results</title><p>The <italic>LRX</italic> gene family of <italic>Arabidopsis</italic> consists of eleven members, of which <italic>LRX3</italic>, <italic>LRX4</italic>, and <italic>LRX5</italic> are expressed in aerial organs, such as leaves and stem. The importance of these <italic>LRX</italic> genes for plant development and particularly cell wall formation was investigated. Synergistic effects of mutations with gradually more severe growth retardation phenotypes in double and triple mutants suggest a similar function of the three genes. Analysis of cell wall composition revealed a number of changes to cell wall polysaccharides in the mutants.</p></sec><sec><title>Conclusions</title><p>LRX3, LRX4, and LRX5, and most likely LRX proteins in general, are important for cell wall development. Due to the complexity of changes in cell wall structures in the <italic>lrx</italic> mutants, the exact function of LRX proteins remains to be determined. The increasingly strong growth-defect phenotypes in double and triple mutants suggests that the LRX proteins have similar functions and that they are important for proper plant development.</p></sec><sec><title>Electronic supplementary material</title><p>The online version of this article (doi:10.1186/s12870-015-0548-8) contains supplementary material, which is available to authorized users.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Cosgrove, Dj" uniqKey="Cosgrove D">DJ Cosgrove</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wolf, S" uniqKey="Wolf S">S Wolf</name></author><author><name sortKey="Hematy, K" uniqKey="Hematy K">K Hematy</name></author><author><name sortKey="Hoefte, H" uniqKey="Hoefte H">H Hoefte</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Seifert, Gj" uniqKey="Seifert G">GJ Seifert</name></author><author><name sortKey="Blaukopf, 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uniqKey="Sorensen S">SO Sorensen</name></author><author><name sortKey="Orfila, C" uniqKey="Orfila C">C Orfila</name></author><author><name sortKey="Pauly, M" uniqKey="Pauly M">M Pauly</name></author><author><name sortKey="Scheller, Hv" uniqKey="Scheller H">HV Scheller</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Updegraff, Dm" uniqKey="Updegraff D">DM Updegraff</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Fukushima, Rs" uniqKey="Fukushima R">RS Fukushima</name></author><author><name sortKey="Hatfield, Rd" uniqKey="Hatfield R">RD Hatfield</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Australie</li><li>France</li><li>Nouvelle-Zélande</li><li>Suisse</li><li>États-Unis</li></country><region><li>Californie</li><li>Canton de Zurich</li><li>Victoria (État)</li><li>Île-de-France</li></region><settlement><li>Melbourne</li><li>Versailles</li><li>Zurich</li></settlement><orgName><li>Université de Melbourne</li><li>Université de Zurich</li></orgName></list><tree><country name="Suisse"><region name="Canton de Zurich"><name sortKey="Draeger, Christian" sort="Draeger, Christian" uniqKey="Draeger C" first="Christian" last="Draeger">Christian Draeger</name></region><name sortKey="Abdou, Marie Therese" sort="Abdou, Marie Therese" uniqKey="Abdou M" first="Marie-Therese" last="Abdou">Marie-Therese Abdou</name><name sortKey="Draeger, Christian" sort="Draeger, Christian" uniqKey="Draeger C" first="Christian" last="Draeger">Christian Draeger</name><name sortKey="Frey, Beat" sort="Frey, Beat" uniqKey="Frey B" first="Beat" last="Frey">Beat Frey</name><name sortKey="Ndinyanka Fabrice, Tohnyui" sort="Ndinyanka Fabrice, Tohnyui" uniqKey="Ndinyanka Fabrice T" first="Tohnyui" last="Ndinyanka Fabrice">Tohnyui Ndinyanka Fabrice</name><name sortKey="Ringli, Christoph" sort="Ringli, Christoph" uniqKey="Ringli C" first="Christoph" last="Ringli">Christoph Ringli</name></country><country name="France"><region name="Île-de-France"><name sortKey="Gineau, Emilie" sort="Gineau, Emilie" uniqKey="Gineau E" first="Emilie" last="Gineau">Emilie Gineau</name></region><name sortKey="Gineau, Emilie" sort="Gineau, Emilie" uniqKey="Gineau E" first="Emilie" last="Gineau">Emilie Gineau</name><name sortKey="Mouille, Gregory" sort="Mouille, Gregory" uniqKey="Mouille G" first="Grégory" last="Mouille">Grégory Mouille</name></country><country name="États-Unis"><region name="Californie"><name sortKey="Kuhn, Benjamin M" sort="Kuhn, Benjamin M" uniqKey="Kuhn B" first="Benjamin M." last="Kuhn">Benjamin M. Kuhn</name></region><name sortKey="Pauly, Markus" sort="Pauly, Markus" uniqKey="Pauly M" first="Markus" last="Pauly">Markus Pauly</name></country><country name="Australie"><region name="Victoria (État)"><name sortKey="Moller, Isabel" sort="Moller, Isabel" uniqKey="Moller I" first="Isabel" last="Moller">Isabel Moller</name></region><name sortKey="Bacic, Antony" sort="Bacic, Antony" uniqKey="Bacic A" first="Antony" last="Bacic">Antony Bacic</name></country><country name="Nouvelle-Zélande"><noRegion><name sortKey="Moller, Isabel" sort="Moller, Isabel" uniqKey="Moller I" first="Isabel" last="Moller">Isabel Moller</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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